CDS

Accession Number TCMCG057C08629
gbkey CDS
Protein Id XP_018471211.1
Location join(35276376..35277095,35277169..35277637,35277735..35277820,35277919..35278032,35278121..35278309,35278402..35278467,35278655..35278708,35278837..35278962,35279083..35279199,35279362..35279469,35279559..35279685,35279929..35280066,35280304..35280477,35280562..35280830,35280981..35281163,35281452..35281629,35281742..35281947,35282034..35282223,35282289..35282514,35282604..35282759,35282851..35282941)
Gene LOC108842713
GeneID 108842713
Organism Raphanus sativus

Protein

Length 1328aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018615709.1
Definition PREDICTED: abnormal spindle-like microcephaly-associated protein homolog isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Z
Description Calponin homology (CH) domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K16743        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAATGAAGAAAACGAACCACCGTGCGCTACACCGGCGCCGCGGCCGCGTAATCCTCCGCCATCGCTCTTCACCGACGTATCCAATTTCAAAACTCCGCGGCGTCCTTTCGTAGCTAAGCCAAATCTCGGTAACACTCCGTATCCGCCGCAGCTCTTCACCGCATCGAAGCAAACTCCCAAATCCTCCTCCTCCTCCAACCTCCGCCGTCCCTCGCTCCTTCCTTCTCACGCGTCTCGCTCCAAGGTCGCCGCAGCTTCCTCGAGGCGGCTCAGGGCGTTCGAGCTTCAGCAGTTGCAGTCTTCTCGCAAGGCCGAGTTGATTAAAGAGAAGAGCCTTAGATCTCTCGCTAAATCGCTCACTGTGTGGCTCAATTTCTTGTTCGAGAACCCTGAGAGTTGCGGTTGCGATCCGTTAGAGAAGGGATCTGCTGTTGGTAGCTTCAGACAGGGGAAGAGAGATAGTTGCGAGGGTTTACGGAGAGGTAAATCAGTGGGTGTCGATACGATGTGGCGTAGCCCTAAAAAGTCGAGGACTTTAGGTTGGTGTGGCGAGAAAGGATCAGATATTGGATCATCCTTGAGTGGCGCCAAGTATTCAACGCTGAGGGAGTCTTTGAAAGAAGTGTGTAGTTTAGATGATTTGAAGCAGAGGATGCAGTTTCATTTGAGTTTGGGAAGTTGCAAGGAGATTTTCGATGTGATGACCCGTGTCACCAAGAATATCGATGAAGGGAGGATAAAGATGAAACCACAATGCCCTCTTGTAACTGATTTTGGACTTAAGGAGAAGGCCGTCAAGGCGCTGATGTGTTACAACCAAGTTTGGCTTCGTTTAGGGTTGTATATCATCTTTGGCGGCGATTCCTTTTTGTCTGACGCTGAAGTTAACTCAGATCAAGAAATGGCATTCTTGAAGATGGTAATCAACAAGCAGTTTTTCTCCCATGACGGCCTTGCTAGAGCCTTTGCCTATAACAAGATGGTTGAGGGTTTATACAGGCCTGGGTACTATGAAGCCCTTGGGACCGTGATTTTGAAGAGGATTCTGTTGCTTGTTCTTATATTAGATAGAGCTAAATCTCAAAGCTGTATTTCGCTCAAGTATGGGATTGATGGGATAGATGGTGGCTCACCCCTCTTGTTTTCAGAGAAATCTAGCATAAAGTCTAGCCATCAACTTCTAAGTGAACTCTTGCCCTCTGATGTAATGCATGGAGAAGGGAATCTCCTAGCGCATCTAGTGATTATAGGGTACAAAATACCTTATCAGCAGTCTCCTATAGCTGAATATGAATTTAGAGCGAGCGACTTGTTTGGTGACCTCCAAGATGGCGTGCGGCTCTGCAGAGCCATTCAACTACTTCTTCATGATCCATCCATTCTCACGAAAATGGTAGTTCCATCCGACAATCGAAAGAAGAACTTGGCCAATTATAGAGTTGCACTTCAGTATCTGAAGGATGCTGGTGTTCCGTTGAAAGATGACGAAGGAATGATGATAACTATAGAAGATGTTGCAGATGGTGACAGAGAGCTCACTATTTCACTGCTATGGAACATTTTTGTACATTTGCAGCTGCCTCTTCTGATCAATGGGAAACTCTTGACGGAGGAAATCTACAAAGTCCAGGGGCTGGAACAGAATAATCAAATTACCATGTCTACTCCTCTGGAAATGCTGTTAAACTGGATTCAGTCAATCACCAAGAAGAATGACTTCAAGGTAGAAAACTTTGCATCGTTGGTTGATGGAAAGGGAATATGGTTCTTACTTGACTACTATTTTCGGCGAGAAGTTTGCTGTCCTTGTCTTAACAAAGAGGATCCTGGTGGTCAACAAGGCCCACGATCGGTAATGTCCAATACCGATTACCATGATGCAGTTCAAAACTTCATTCTATCGCAAAAGTTGACAGCACTTTTGGGAAGTTTTCCTGAGGTTCTACAGATTGGTGACCTACTGGAACATAATGCAGTAGTTAGCAACCAAAGTGTGATTATACTGTTGGCTTTCTTATCATCGAAGCTGATCGTCAAGGAAAATATGGAGCAACTGAACTTTCATAAGTTGCTGTGCTCTAGCTGTCAAACTCAGGAGAAGAGATATTCGCGCATCAGTTGCAGCATCTCCGAAGCAGATAGAAATGAGGAACCGGACAGAGAAAACGGAGAAGATGCTACTAAAACTTTCCGAGCAATCAAAGCCTGGTGGCAGGACATGGCCAACCAAAGCCAAAATTCTGTTGGAGAACTTATTAGCCATACTCCGCAAGATTCCTTGTCTAGGAAATGCACAATGGATTTTGAACGAGAAGCAGCAGTGGTCATACAATCAAATTTCAGGGGACTTCATGCACGCCGCAAGTTTAGGAAGAAAATGAGAGCAGTCTGCTTCTTACAAGCTGCTGTTCGGACATGGTTGTCAGTGAAACATATAAAAGTTCTTGAAAAATACACTGTTCAGGAAGTTACTTTACAGCTATCAGAAAGATCGGTCAACTTACAATCTGTAGCAAGATATGTAAAGTTCATTGTTGAACGAAGTCGCTTCGTGAAGTTGAGGAAATCTGTTTTGGTCATTCAGAATGCTGTAAGGAGACATCAGCGAGACCTGAAAGCAGCACTCAAAATTCAGCTAGCTTGGAGGAGTTATAAGGACAAAGTTATCTCTTCTATCACCATCCAATCTTATGTTCGTGGATGGATCACACGTAGAATGAATTACAAGTACAAGTTGTCTTGCGTAGTTATTCAAAAAGCTGTAAGGAAGCATCAGCGACACCTTCATCATGAGCTGAAAGCAGCACTCAAAATTCAGCTAGCTTGGAGGAGTTATAAGGAAAAAGTTATCTCCTCTATCACCATCCAAGCTTATGTTCGTGGAAGGATCATACGTAAAATCTATGGCAATTACAAGTTGTCTTCCGTACTTATTCAAAGATACTGCCGTGGTTGGCTGGCGAGAAGGAAGTTTTATCTTCAGAGAGAGGCAACAATATGCATTCAAAGTGCTATTCGAAAATGTAACTGCATTACGTCATTTCATGGCTACAAGCATGCAGCCACAGAGCTTCAACGACTCGTTAGAGGACAAATTGTTAGAAGGAGGGTTCAAGTTGACGAAGGCGTTTCCGAACTTTCGCAACACAGCGTTGAGATGACAGAACTGCTACGTTCCGTCATTAAGCTGCAGCGTTGGTGGAGGTTTCTCCATTCACAGAACGTTAGAAGAAAATCAGCAGTCTTGATACAAAAGCATATTCGAGGTGTGTTTGCCAGGCGAAGAACTTCTATGGAAAGACGTTACATTGTCATGATTCAATCACACTGGAGAGGCTATCTCACACGCAAAGCCGCAAAGGCTCAAGTTCTAGAATTGAGAGTAAGAATGCAAACTTCTGCAGCAAACATAGATGACAGGAAACGGTTAATAAACAAGCTTCTCTCTGCGCTTTCGGAACTACTCAGCATGAAAAAGGTCCACAACATTCTGCACATCTGTGAAACTTTGGATTCGGCGACAAAATACTCTGAGAAATGCTGTGAAGAGCTTGTGGCAGCTGGAGCGATAGACAAGTTGCTAACACTGATTCGGTCTGCAAGCAGAAGCATCCCTGATCAAGAAGTTGCAAAACATGCACTCTCAACTTTGAGGCACCTGGCTCGTTACCCACAAATGGCAGATGAGTTAATAGACACGAAAGGATCCATCCAGACAATTTTCTGGGAACTACTCAGGAACAAAGAAGAAGCATATTTCATAGTATCAGATGTTCTGAAGAAGATATGCAGAAGTCACAAAGGCGTAGAAGCAGTTCGGAACCTTCCTGCGTTGGTAAAACGACTACACGCCTTAGTTGAGGAGCTGACTCGTAAGGCAAATATGGAGAAGAGGAATGTTAAGGGTCAGAGTGGAAAAGAAAAGAGCGAGGGAAGAAGATTAAAGGAGGCGGTTGAGCTTCTGAAGCTCATAACCAGCAGATGA
Protein:  
MNEENEPPCATPAPRPRNPPPSLFTDVSNFKTPRRPFVAKPNLGNTPYPPQLFTASKQTPKSSSSSNLRRPSLLPSHASRSKVAAASSRRLRAFELQQLQSSRKAELIKEKSLRSLAKSLTVWLNFLFENPESCGCDPLEKGSAVGSFRQGKRDSCEGLRRGKSVGVDTMWRSPKKSRTLGWCGEKGSDIGSSLSGAKYSTLRESLKEVCSLDDLKQRMQFHLSLGSCKEIFDVMTRVTKNIDEGRIKMKPQCPLVTDFGLKEKAVKALMCYNQVWLRLGLYIIFGGDSFLSDAEVNSDQEMAFLKMVINKQFFSHDGLARAFAYNKMVEGLYRPGYYEALGTVILKRILLLVLILDRAKSQSCISLKYGIDGIDGGSPLLFSEKSSIKSSHQLLSELLPSDVMHGEGNLLAHLVIIGYKIPYQQSPIAEYEFRASDLFGDLQDGVRLCRAIQLLLHDPSILTKMVVPSDNRKKNLANYRVALQYLKDAGVPLKDDEGMMITIEDVADGDRELTISLLWNIFVHLQLPLLINGKLLTEEIYKVQGLEQNNQITMSTPLEMLLNWIQSITKKNDFKVENFASLVDGKGIWFLLDYYFRREVCCPCLNKEDPGGQQGPRSVMSNTDYHDAVQNFILSQKLTALLGSFPEVLQIGDLLEHNAVVSNQSVIILLAFLSSKLIVKENMEQLNFHKLLCSSCQTQEKRYSRISCSISEADRNEEPDRENGEDATKTFRAIKAWWQDMANQSQNSVGELISHTPQDSLSRKCTMDFEREAAVVIQSNFRGLHARRKFRKKMRAVCFLQAAVRTWLSVKHIKVLEKYTVQEVTLQLSERSVNLQSVARYVKFIVERSRFVKLRKSVLVIQNAVRRHQRDLKAALKIQLAWRSYKDKVISSITIQSYVRGWITRRMNYKYKLSCVVIQKAVRKHQRHLHHELKAALKIQLAWRSYKEKVISSITIQAYVRGRIIRKIYGNYKLSSVLIQRYCRGWLARRKFYLQREATICIQSAIRKCNCITSFHGYKHAATELQRLVRGQIVRRRVQVDEGVSELSQHSVEMTELLRSVIKLQRWWRFLHSQNVRRKSAVLIQKHIRGVFARRRTSMERRYIVMIQSHWRGYLTRKAAKAQVLELRVRMQTSAANIDDRKRLINKLLSALSELLSMKKVHNILHICETLDSATKYSEKCCEELVAAGAIDKLLTLIRSASRSIPDQEVAKHALSTLRHLARYPQMADELIDTKGSIQTIFWELLRNKEEAYFIVSDVLKKICRSHKGVEAVRNLPALVKRLHALVEELTRKANMEKRNVKGQSGKEKSEGRRLKEAVELLKLITSR